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Aatto Laaksonen

Sweden
Department of Materials and Environmental chemistry
Stockholm University
Fellow:
  • 2014 First Semester

Involved in these STIAS projects

Roughly 30% of global energy consumption today is friction – a colossal loss. Tribology is an inter-disciplinary research field to understand, minimize and in the end to eliminate friction and wear...
 

Related publications

Journal Article

Yong-Lei Wang, Zhong-Yuan Lu and Aatto Laaksonen. 2014. Heterogeneous dynamics of ionic liquids in confined films with varied film thickness. Physical Chemistry Chemical Physics, 16 (38), 20731-20740

Journal Article

Guido Todde, Sven Hovmöller, Aatto Laaksonen and Francesca Mocci. 2014. Glucose oxidase from Penicillium amagasakiense: Characterization of the transition state of its denaturation from molecular dynamics simulations. Proteins: Structure, Function, and Bioinformatics, 82 (10), 2353–2363

Journal Article

Tianyang Sun, Guang Han, Matteus Lindgren, Zhijian Shen and Aatto Laaksonen. 2014. Adhesion of lactoferrin and bone morphogenetic protein-2 to a rutile surface: dependence on the surface hydrophobicity. Biomaterials Science, 2 (8,) 1090-1099

Journal Article

Sten Sarman and Aatto Laaksonen. 2014. Director alignment relative to the temperature gradient in nematic liquid crystals studied by molecular dynamics simulation. Physical Chemistry Chemical Physics, 16 (28), 14741-14749

Journal Article

Aymeric Naome, Aatto Laaksonen and Daniel P. Vercauteren. 2014. A Solvent-Mediated Coarse-Grained Model of DNA Derived with the Systematic Newton Inversion Method. Journal of Chemical Theory and Computation, 10 (8), 3541-3549

Journal Article

Wang, Yong-Lei, and Aatto Laaksonen. 2014. Interfacial Structure and Orientation of Confined Ionic Liquids on Charged Quartz Surfaces. Phys. Chem. Chem. Phys. 16 (42): 23329–39. doi:10.1039/C4CP03077J.

Journal Article

Wang, Yong-Lei, Sten Sarman, Sergei Glavatskih, Oleg N. Antzutkin, Mark W. Rutland, and Aatto Laaksonen. 2015. Atomistic Insight into Tetraalkylphosphonium-Bis(oxalato)borate Ionic Liquid/Water Mixtures. I. Local Microscopic Structure. The Journal of Physical Chemistry B 119 (16): 5251–64. doi:10.1021/acs.jpcb.5b00667.

Journal Article

Todde, Guido, Christopher Whitman, Sven Hovmöller, and Aatto Laaksonen. 2014. Induced Ice Melting by the Snow Flea Antifreeze Protein from Molecular Dynamics Simulations. The Journal of Physical Chemistry B 118 (47): 13527–34. doi:10.1021/jp508992e.

Journal Article

Todde, Guido, Sven Hovmöller, Aatto Laaksonen, and Francesca Mocci. 2014. Glucose Oxidase from Penicillium Amagasakiense : Characterization of the Transition State of Its Denaturation from Molecular Dynamics Simulations. Proteins: Structure, Function, and Bioinformatics 82 (10): 2353–63. doi:10.1002/prot.24596.

Journal Article

Todde, Guido, Sven Hovmöller, and Aatto Laaksonen. 2015. Influence of Antifreeze Proteins on the Ice/Water Interface. The Journal of Physical Chemistry B 119 (8): 3407–13. doi:10.1021/jp5119713.

Journal Article

Rebič, Matúš, Francesca Mocci, Aatto Laaksonen, and Jozef Uličný. 2015. Multiscale Simulations of Human Telomeric G-Quadruplex DNA. The Journal of Physical Chemistry B 119 (1): 105–13. doi:10.1021/jp5103274.

Journal Article

Naômé, Aymeric, Aatto Laaksonen, and Daniel P. Vercauteren. 2015. A Coarse-Grained Simulation Study of the Structures, Energetics, and Dynamics of Linear and Circular DNA with Its Ions. Journal of Chemical Theory and Computation 11 (6): 2813–26. doi:10.1021/acs.jctc.5b00113.

Journal Article

Fossépré, Mathieu, Laurence Leherte, Aatto Laaksonen, and Daniel P Vercauteren. 2014. On the Modularity of the Intrinsic Flexibility of the µ Opioid Receptor: A Computational Study. Edited by Pratul K. Agarwal. PLoS ONE 9 (12): e115856. doi:10.1371/journal.pone.0115856.

Book/Book Chapter

Mocci, Francesca, and Aatto Laaksonen. 2015. Combining MD Simulations and NMR Spectroscopy for Molecular Insight and Methodological Synergy: The Integrated MD-NMR Method. In Nuclear Magnetic Resonance Volume 44, edited by K Kamienska-Trela, 592–616. Cambridge: Royal Society of Chemistry. doi:10.1039/9781782622758-00592.

Journal Article

Rebič, Matúš, Aatto Laaksonen, Jiří Šponer, Jozef Uličný, and Francesca Mocci. 2016. Molecular Dynamics Simulation Study of Parallel Telomeric DNA Quadruplexes at Different Ionic Strengths: Evaluation of Water and Ion Models. The Journal of Physical Chemistry B 120(30):7380–91. http://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6b06485

Journal Article

Golets, Mikhail, Manishkumar R Shimpi, Yong-Lei Wang, Oleg N Antzutkin, Sergei Glavatskih, and Aatto Laaksonen. 2016. Understanding the Thermal Decomposition Mechanism of a Halogen-Free Chelated Orthoborate-Based Ionic Liquid: A Combined Computational and Experimental Study. Phys. Chem. Chem. Phys. 18(32):22458–66. http://xlink.rsc.org/?DOI=C6CP03191A

Journal Article

Fossépré, Mathieu, Laurence Leherte, Aatto Laaksonen, and Daniel P Vercauteren. 2016. Multiscale Design of Coarse-Grained Elastic Network-Based Potentials for the μ Opioid Receptor. Journal of Molecular Modeling 22(9):227. http://link.springer.com/10.1007/s00894-016-3092-z

Journal Article

Rebič, Matúš, Francesca Mocci, Jozef Uličný, Alexander P Lyubartsev, and Aatto Laaksonen. 2017. Coarse-Grained Simulation of Rodlike Higher-Order Quadruplex Structures at Different Salt Concentrations. ACS Omega 2(2):386–96. http://pubs.acs.org/doi/abs/10.1021/acsomega.6b00419

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